Sequence Similarity Clusters for the Entities in PDB 1ODD

Entity #1 | Chains: A
TRANSCRIPTIONAL REGULATORY PROTEIN OMPR protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27362
95 % 2 3 24007 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 3 23232
70 % 2 3 21135
50 % 2 3 18175
40 % 2 3 16747
30 % 10 28 913

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures