Sequence Similarity Clusters for the Entities in PDB 1ODA

Entity #1 | Chains: A
SIALOADHESIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 6729
95 % 7 7 7311 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 7 7 7263
70 % 7 7 7078
50 % 7 7 6520
40 % 7 7 6075
30 % 7 7 5432

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.