Sequence Similarity Clusters for the Entities in PDB 1OD9

Entity #1 | Chains: A
SIALOADHESIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 6886
95 % 2 7 7470 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 7 7425
70 % 2 7 7224
50 % 2 7 6654
40 % 2 7 6201
30 % 2 7 5547

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures