Sequence Similarity Clusters for the Entities in PDB 1OD5

Entity #1 | Chains: A,B
GLYCININ protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 5805
95 % 2 3 6430 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.4
PDBFlex
90 % 2 3 6410
70 % 2 3 6242
50 % 2 3 5819
40 % 3 14 1173
30 % 3 14 1152

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.