Sequence Similarity Clusters for the Entities in PDB 1OD5

Entity #1 | Chains: A,B
GLYCININ protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 6134
95 % 2 3 6774 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.4
PDBFlex
90 % 2 3 6754
70 % 2 3 6584
50 % 2 3 6124
40 % 4 16 1124
30 % 4 16 1104

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures