Sequence Similarity Clusters for the Entities in PDB 1OD1

Entity #1 | Chains: A
ENDOTHIAPEPSIN protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 271 524 8
95 % 271 524 17 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 271 524 18
70 % 271 524 26
50 % 273 543 54
40 % 273 551 63
30 % 277 717 31

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures