Sequence Similarity Clusters for the Entities in PDB 1OCW

Entity #1 | Chains: H
IMMUNOGLOBULIN E protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4402
95 % 4 8 3798 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 7 11 2903
70 % 31 85 259
50 % 282 576 7
40 % 452 929 5
30 % 507 1056 7
Entity #2 | Chains: L
IMMUNOGLOBULIN E protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 4404
95 % 8 12 2194 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 9 13 2164
70 % 9 13 2154
50 % 151 308 21
40 % 453 929 5
30 % 508 1056 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.