Sequence Similarity Clusters for the Entities in PDB 1OCU

Entity #1 | Chains: A,B
SORTING NEXIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27055
95 % 2 2 23802 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 2 2 23027
70 % 2 2 20958
50 % 2 2 18032
40 % 2 2 15939
30 % 2 2 13363

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures