Sequence Similarity Clusters for the Entities in PDB 1OCU

Entity #1 | Chains: A,B
SORTING NEXIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28339
95 % 2 2 23556 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 2 2 22788
70 % 2 2 20786
50 % 2 2 17990
40 % 2 2 16036
30 % 2 2 13713

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.