Sequence Similarity Clusters for the Entities in PDB 1OCS

Entity #1 | Chains: A
SORTING NEXIN GRD19 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29583
95 % 1 2 24535 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 1 2 23705
70 % 1 2 21577
50 % 1 2 18640
40 % 1 2 16601
30 % 1 2 14193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures