Sequence Similarity Clusters for the Entities in PDB 1OCS

Entity #1 | Chains: A
SORTING NEXIN GRD19 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28555
95 % 1 2 23720 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 1 2 22943
70 % 1 2 20919
50 % 1 2 18098
40 % 1 2 16133
30 % 1 2 13796

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.