Sequence Similarity Clusters for the Entities in PDB 1OCO

Entity #1 | Chains: A,N
CYTOCHROME C OXIDASE protein, length: 514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 35 491
95 % 31 37 649
90 % 31 37 677
70 % 31 37 723
50 % 43 51 535
40 % 43 51 575
30 % 43 51 568
Entity #10 | Chains: J,W
CYTOCHROME C OXIDASE protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 34 538
95 % 30 36 704
90 % 30 36 737
70 % 30 36 779
50 % 30 36 825
40 % 30 36 854
30 % 30 36 844
Entity #11 | Chains: K,X
CYTOCHROME C OXIDASE protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 33 559
95 % 29 33 774
90 % 29 33 804
70 % 29 33 845
50 % 29 33 884
40 % 29 33 904
30 % 29 33 886
Entity #12 | Chains: L,Y
CYTOCHROME C OXIDASE protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 36 506
95 % 30 36 705
90 % 30 36 738
70 % 30 36 780
50 % 30 36 826
40 % 30 36 855
30 % 30 36 845
Entity #13 | Chains: M,Z
CYTOCHROME C OXIDASE protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 36 507
95 % 30 36 706
90 % 30 36 739
70 % 30 36 781
50 % 30 36 827
40 % 30 36 856
30 % 30 36 846
Entity #2 | Chains: B,O
CYTOCHROME C OXIDASE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 35 500
95 % 31 37 655
90 % 31 37 683
70 % 31 37 727
50 % 31 37 778
40 % 31 37 814
30 % 40 48 593
Entity #3 | Chains: C,P
CYTOCHROME C OXIDASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 4027
95 % 31 37 652
90 % 31 37 680
70 % 31 37 724
50 % 31 37 776
40 % 32 40 740
30 % 32 40 733
Entity #4 | Chains: D,Q
CYTOCHROME C OXIDASE protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 34 534
95 % 30 36 697
90 % 30 36 730
70 % 30 36 774
50 % 30 36 819
40 % 30 36 849
30 % 30 36 836
Entity #5 | Chains: E,R
CYTOCHROME C OXIDASE protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 36 504
95 % 30 36 699
90 % 30 36 732
70 % 30 36 775
50 % 30 36 821
40 % 30 36 850
30 % 30 36 839
Entity #6 | Chains: F,S
CYTOCHROME C OXIDASE protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 34 535
95 % 30 36 700
90 % 30 36 733
70 % 30 36 776
50 % 30 36 822
40 % 30 36 851
30 % 30 36 840
Entity #7 | Chains: G,T
CYTOCHROME C OXIDASE protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 34 536
95 % 30 36 703
90 % 30 36 736
70 % 30 36 778
50 % 30 36 824
40 % 30 36 853
30 % 30 36 843
Entity #8 | Chains: H,U
CYTOCHROME C OXIDASE protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 37 475
95 % 31 37 668
90 % 31 37 697
70 % 31 37 744
50 % 31 37 788
40 % 31 37 821
30 % 31 37 810
Entity #9 | Chains: I,V
CYTOCHROME C OXIDASE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 35 505
95 % 31 37 669
90 % 31 37 698
70 % 31 37 746
50 % 31 37 791
40 % 31 37 823
30 % 31 37 812

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.