Sequence Similarity Clusters for the Entities in PDB 1OCO

Entity #1 | Chains: A,N
CYTOCHROME C OXIDASE protein, length: 514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 43 378
95 % 37 45 513
90 % 37 45 544
70 % 37 45 588
50 % 49 60 468
40 % 49 60 500
30 % 49 60 502
Entity #10 | Chains: J,W
CYTOCHROME C OXIDASE protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 42 410
95 % 36 44 548
90 % 36 44 581
70 % 36 44 618
50 % 36 44 662
40 % 36 44 693
30 % 36 44 691
Entity #11 | Chains: K,X
CYTOCHROME C OXIDASE protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 39 454
95 % 35 39 626
90 % 35 39 654
70 % 35 39 700
50 % 35 39 749
40 % 35 39 782
30 % 35 39 776
Entity #12 | Chains: L,Y
CYTOCHROME C OXIDASE protein, length: 47 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 44 387
95 % 36 44 549
90 % 36 44 583
70 % 36 44 619
50 % 36 44 663
40 % 36 44 694
30 % 36 44 692
Entity #13 | Chains: M,Z
CYTOCHROME C OXIDASE protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 44 388
95 % 36 44 550
90 % 36 44 584
70 % 36 44 620
50 % 36 44 664
40 % 36 44 695
30 % 36 44 693
Entity #2 | Chains: B,O
CYTOCHROME C OXIDASE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 43 381
95 % 37 45 517
90 % 37 45 549
70 % 37 45 594
50 % 37 45 637
40 % 37 45 666
30 % 46 57 523
Entity #3 | Chains: C,P
CYTOCHROME C OXIDASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 4215
95 % 37 45 516
90 % 37 45 548
70 % 37 45 593
50 % 37 45 636
40 % 38 49 614
30 % 38 49 607
Entity #4 | Chains: D,Q
CYTOCHROME C OXIDASE protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 42 406
95 % 36 44 543
90 % 36 44 575
70 % 36 44 612
50 % 36 44 658
40 % 36 44 689
30 % 36 44 686
Entity #5 | Chains: E,R
CYTOCHROME C OXIDASE protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 44 384
95 % 36 44 545
90 % 36 44 578
70 % 36 44 615
50 % 36 44 659
40 % 36 44 690
30 % 36 44 687
Entity #6 | Chains: F,S
CYTOCHROME C OXIDASE protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 42 407
95 % 36 44 546
90 % 36 44 579
70 % 36 44 616
50 % 36 44 660
40 % 36 44 691
30 % 36 44 689
Entity #7 | Chains: G,T
CYTOCHROME C OXIDASE protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 42 409
95 % 36 44 547
90 % 36 44 580
70 % 36 44 617
50 % 36 44 661
40 % 36 44 692
30 % 36 44 690
Entity #8 | Chains: H,U
CYTOCHROME C OXIDASE protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 45 367
95 % 37 45 523
90 % 37 45 556
70 % 37 45 599
50 % 37 45 642
40 % 37 45 672
30 % 37 45 672
Entity #9 | Chains: I,V
CYTOCHROME C OXIDASE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 43 386
95 % 37 45 524
90 % 37 45 557
70 % 37 45 600
50 % 37 45 643
40 % 37 45 673
30 % 37 45 673

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.