Sequence Similarity Clusters for the Entities in PDB 1OCM

Entity #1 | Chains: A,B
MALONAMIDASE E2 protein, length: 412 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12062
95 % 6 12 2532 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 6 12 2592
70 % 6 12 2582
50 % 6 12 2564
40 % 6 12 2521
30 % 11 34 753

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures