Sequence Similarity Clusters for the Entities in PDB 1OC0

Entity #1 | Chains: A
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 2978
95 % 6 21 1117
90 % 6 21 1142
70 % 7 22 1150
50 % 7 22 1200
40 % 10 26 1057
30 % 68 174 177
Entity #2 | Chains: B
VITRONECTIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28080
95 % 1 3 23270
90 % 1 3 22543
70 % 1 3 20647
50 % 1 3 17956
40 % 1 3 15988
30 % 1 3 13723

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.