Sequence Similarity Clusters for the Entities in PDB 1OC0

Entity #1 | Chains: A
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 3276
95 % 6 21 1219
90 % 6 21 1244
70 % 7 22 1235
50 % 7 22 1299
40 % 10 26 1139
30 % 71 178 185
Entity #2 | Chains: B
VITRONECTIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 30511
95 % 1 3 25282
90 % 1 3 24446
70 % 1 3 22217
50 % 1 3 19233
40 % 1 3 17119
30 % 1 3 14687

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures