Sequence Similarity Clusters for the Entities in PDB 1OC0

Entity #1 | Chains: A
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 3156
95 % 6 21 1182
90 % 6 21 1209
70 % 7 22 1205
50 % 7 22 1265
40 % 10 26 1110
30 % 71 178 183
Entity #2 | Chains: B
VITRONECTIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 29644
95 % 1 3 24581
90 % 1 3 23790
70 % 1 3 21682
50 % 1 3 18787
40 % 1 3 16728
30 % 1 3 14342

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.