Sequence Similarity Clusters for the Entities in PDB 1OC0

Entity #1 | Chains: A
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 2949
95 % 6 21 1104
90 % 6 21 1128
70 % 7 22 1140
50 % 7 22 1187
40 % 10 26 1040
30 % 68 174 175
Entity #2 | Chains: B
VITRONECTIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27726
95 % 1 3 22978
90 % 1 3 22258
70 % 1 3 20382
50 % 1 3 17728
40 % 1 3 15784
30 % 1 3 13528

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.