Sequence Similarity Clusters for the Entities in PDB 1OBZ

Entity #1 | Chains: A,B
SYNTENIN 1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 3301
95 % 2 9 3078 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.2
PDBFlex
90 % 2 9 3123
70 % 2 9 3096
50 % 2 9 3023
40 % 2 9 2945
30 % 2 9 2759
Entity #2 | Chains: P
INTERLEUKIN 5 RECEPTOR ALPHA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.