Sequence Similarity Clusters for the Entities in PDB 1OBY

Entity #1 | Chains: A,B
SYNTENIN 1 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 14642
95 % 4 4 13758
90 % 4 4 13500
70 % 4 4 12681
50 % 4 4 11336
40 % 4 4 10294
30 % 4 4 8948
Entity #2 | Chains: P,Q
SYNDECAN-4 protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.