Sequence Similarity Clusters for the Entities in PDB 1OBX

Entity #1 | Chains: A
SYNTENIN 1 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 16805
95 % 3 4 15601 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 4 15273
70 % 3 4 14296
50 % 3 4 12625
40 % 3 4 11334
30 % 3 4 9626
Entity #2 | Chains: B
INTERLEUKIN 5 RECEPTOR ALPHA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures