Sequence Similarity Clusters for the Entities in PDB 1OBX

Entity #1 | Chains: A
SYNTENIN 1 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 16077
95 % 3 4 15067 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 4 14788
70 % 3 4 13851
50 % 3 4 12295
40 % 3 4 11146
30 % 3 4 9685
Entity #2 | Chains: B
INTERLEUKIN 5 RECEPTOR ALPHA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.