Sequence Similarity Clusters for the Entities in PDB 1OBB

Entity #1 | Chains: A,B
ALPHA-GLUCOSIDASE protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32363
95 % 1 1 26313 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 2.1
PDBFlex
90 % 1 1 25420
70 % 1 1 23074
50 % 1 1 19934
40 % 1 3 6273
30 % 1 3 5609

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures