Sequence Similarity Clusters for the Entities in PDB 1OBB

Entity #1 | Chains: A,B
ALPHA-GLUCOSIDASE protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43903
95 % 1 1 36690 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 2.1
PDBFlex
90 % 1 1 35035
70 % 1 1 31155
50 % 1 3 7086
40 % 1 3 6805
30 % 1 3 5962

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures