Sequence Similarity Clusters for the Entities in PDB 1OB5

Entity #1 | Chains: A,C,E
ELONGATION FACTOR TU protein, length: 405 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 5372
95 % 22 25 1269 Flexibility: Medium
Max RMSD: 12.2, Avg RMSD: 5.6
PDBFlex
90 % 22 26 1267
70 % 43 65 428
50 % 45 67 487
40 % 45 67 523
30 % 64 92 374
Entity #2 | Chains: B,D,F
TRANSFER-RNA, PHE rna, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.