Sequence Similarity Clusters for the Entities in PDB 1OB5

Entity #1 | Chains: A,C,E
ELONGATION FACTOR TU protein, length: 405 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 5646
95 % 22 25 1316 Flexibility: Medium
Max RMSD: 12.2, Avg RMSD: 5.7
PDBFlex
90 % 22 26 1313
70 % 43 65 469
50 % 45 67 506
40 % 45 67 550
30 % 65 93 412
Entity #2 | Chains: B,D,F
TRANSFER-RNA, PHE rna, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures