Sequence Similarity Clusters for the Entities in PDB 1OB1

Entity #1 | Chains: A,D
ANTIBODY, HEAVY CHAIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40184
95 % 5 6 10353
90 % 101 145 141
70 % 1909 2280 1
50 % 3874 4619 1
40 % 3874 4619 1
30 % 4589 5440 1
Entity #2 | Chains: B,E
ANTIBODY, LIGHT CHAIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39790
95 % 1 1 30449
90 % 1 1 29277
70 % 1875 2238 2
50 % 3875 4619 1
40 % 3875 4619 1
30 % 4590 5440 1
Entity #3 | Chains: C,F
MAJOR MEROZOITE SURFACE PROTEIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 29139
95 % 1 2 24151
90 % 1 2 23380
70 % 1 2 21299
50 % 3 7 5825
40 % 3 7 5451
30 % 3 7 4898

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.