Sequence Similarity Clusters for the Entities in PDB 1OB0

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 483 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52105
95 % 1 3 21668 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 1 3 21057
70 % 3 16 3698
50 % 3 24 2358
40 % 3 24 2346
30 % 4 28 1955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures