Sequence Similarity Clusters for the Entities in PDB 1OAZ

Entity #1 | Chains: A,B
THIOREDOXIN 1 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45435
95 % 1 1 34035 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 32538
70 % 47 57 396
50 % 135 183 124
40 % 147 198 127
30 % 163 234 119
Entity #2 | Chains: H,J
IMMUNOGLOBULIN E protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 4353
95 % 6 8 3763 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 9 11 2872
70 % 47 82 259
50 % 400 566 7
40 % 646 916 5
30 % 720 1042 7
Entity #3 | Chains: L,N
IMMUNOGLOBULIN E protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 4355
95 % 10 12 2179 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 11 13 2149
70 % 11 13 2141
50 % 209 305 21
40 % 647 916 5
30 % 721 1042 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.