Sequence Similarity Clusters for the Entities in PDB 1OAZ

Entity #1 | Chains: A,B
THIOREDOXIN 1 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44773
95 % 1 1 33542 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 32082
70 % 47 57 391
50 % 135 183 119
40 % 147 198 127
30 % 163 234 118
Entity #2 | Chains: H,J
IMMUNOGLOBULIN E protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 4262
95 % 6 8 3714 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 9 11 2835
70 % 47 82 258
50 % 380 540 8
40 % 625 887 5
30 % 699 1013 7
Entity #3 | Chains: L,N
IMMUNOGLOBULIN E protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 4264
95 % 10 12 2152 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 11 13 2124
70 % 11 13 2122
50 % 208 302 22
40 % 626 887 5
30 % 700 1013 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.