Sequence Similarity Clusters for the Entities in PDB 1OAU

Entity #1 | Chains: H,I,J,K
IMMUNOGLOBULIN E protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 4228
95 % 2 8 3691 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 2 11 2818
70 % 17 82 258
50 % 160 538 8
40 % 255 884 5
30 % 287 1010 7
Entity #2 | Chains: L,M,N,O
IMMUNOGLOBULIN E protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 4230
95 % 2 12 2132 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 3 13 2104
70 % 3 13 2103
50 % 88 301 22
40 % 256 884 5
30 % 288 1010 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.