Sequence Similarity Clusters for the Entities in PDB 1OAU

Entity #1 | Chains: H,I,J,K
IMMUNOGLOBULIN E protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 4927
95 % 2 8 3848 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 2 11 2931
70 % 17 87 266
50 % 181 613 6
40 % 1058 5834 1
30 % 1295 7269 1
Entity #2 | Chains: L,M,N,O
IMMUNOGLOBULIN E protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 2681
95 % 2 12 2335 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 2 12 2402
70 % 3 13 2247
50 % 91 319 21
40 % 99 363 27
30 % 1296 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures