Sequence Similarity Clusters for the Entities in PDB 1OAR

Entity #1 | Chains: H,I,J,K
IMMUNOGLOBULIN E protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 4429
95 % 3 8 3811 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 6 11 2917
70 % 29 85 259
50 % 274 578 7
40 % 439 931 5
30 % 488 1059 7
Entity #2 | Chains: L,M,N,O
IMMUNOGLOBULING E protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 4431
95 % 6 12 2209 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 7 13 2178
70 % 7 13 2172
50 % 147 308 21
40 % 440 931 5
30 % 489 1059 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.