Sequence Similarity Clusters for the Entities in PDB 1OAQ

Entity #1 | Chains: H
HEAVY CHAIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 4191
95 % 1 8 2860 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 1 11 2253
70 % 4 82 251
50 % 25 532 8
40 % 37 874 5
30 % 43 1000 7
Entity #2 | Chains: L
LIGHT CHAIN protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 4192
95 % 1 12 2101 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 1 13 2079
70 % 1 13 2081
50 % 12 297 22
40 % 38 874 5
30 % 44 1000 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.