Sequence Similarity Clusters for the Entities in PDB 1OAQ

Entity #1 | Chains: H
HEAVY CHAIN protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 4397
95 % 1 8 3795 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 1 11 2902
70 % 4 85 257
50 % 28 576 7
40 % 40 929 5
30 % 47 1056 7
Entity #2 | Chains: L
LIGHT CHAIN protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 4399
95 % 1 12 2194
90 % 1 13 2164
70 % 1 13 2154
50 % 12 308 21
40 % 41 929 5
30 % 48 1056 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.