Sequence Similarity Clusters for the Entities in PDB 1OAK

Entity #1 | Chains: L
NMC-4 IGG1 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38442
95 % 14 49 602
90 % 21 63 376
70 % 591 1765 2
50 % 1484 4337 1
40 % 1484 4337 1
30 % 1652 5109 1
Entity #2 | Chains: H
NMC-4 IGG1 protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56427
95 % 2 2 28811
90 % 2 9 7213
70 % 716 2096 1
50 % 1485 4337 1
40 % 1485 4337 1
30 % 1653 5109 1
Entity #3 | Chains: A
VON WILLEBRAND FACTOR protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9825
95 % 5 14 3355
90 % 5 14 3406
70 % 5 15 3119
50 % 5 15 3048
40 % 5 15 2970
30 % 5 15 2798

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.