Sequence Similarity Clusters for the Entities in PDB 1OAK

Entity #1 | Chains: L
NMC-4 IGG1 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40280
95 % 14 53 559
90 % 21 67 369
70 % 757 2280 1
50 % 1553 4619 1
40 % 1553 4619 1
30 % 1740 5440 1
Entity #2 | Chains: H
NMC-4 IGG1 protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58968
95 % 2 2 30174
90 % 2 9 7633
70 % 750 2238 2
50 % 1554 4619 1
40 % 1554 4619 1
30 % 1741 5440 1
Entity #3 | Chains: A
VON WILLEBRAND FACTOR protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 10323
95 % 5 14 3500
90 % 5 14 3551
70 % 5 15 3258
50 % 5 15 3184
40 % 5 15 3101
30 % 5 15 2914

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.