Sequence Similarity Clusters for the Entities in PDB 1OAD

Entity #1 | Chains: A,B
XYLOSE ISOMERASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 18456
95 % 16 66 650 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 19 80 411
70 % 19 80 449
50 % 19 113 227
40 % 19 113 244
30 % 19 113 252

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures