Sequence Similarity Clusters for the Entities in PDB 1OAD

Entity #1 | Chains: A,B
XYLOSE ISOMERASE protein, length: 388 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 64 555
95 % 16 67 660 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 19 81 445
70 % 19 81 476
50 % 19 114 232
40 % 19 114 260
30 % 19 114 279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures