Sequence Similarity Clusters for the Entities in PDB 1O9V

Entity #1 | Chains: A
F17-AG LECTIN DOMAIN protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 8489
95 % 5 7 8533 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 7 14 4474
70 % 7 14 4369
50 % 7 14 4212
40 % 7 14 3981
30 % 7 14 3622

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures