Sequence Similarity Clusters for the Entities in PDB 1O9R

Entity #1 | Chains: A,B,C,D,E,F
AGROBACTERIUM TUMEFACIENS DPS protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13680
95 % 1 1 13045 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 12830
70 % 1 2 3667
50 % 3 12 357
40 % 3 12 374
30 % 3 47 136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures