Sequence Similarity Clusters for the Entities in PDB 1O9Q

Entity #1 | Chains: A,B
MALONAMIDASE E2 protein, length: 414 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 3317
95 % 3 12 2696 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 12 2760
70 % 3 12 2738
50 % 3 12 2708
40 % 3 12 2635
30 % 11 41 620

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures