Sequence Similarity Clusters for the Entities in PDB 1O9K

Entity #1 | Chains: A,C,E,G
RETINOBLASTOMA-ASSOCIATED PROTEIN protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 14591
95 % 2 2 13741
90 % 2 2 13500
70 % 2 2 12661
50 % 2 2 11299
40 % 2 2 10239
30 % 2 2 8875
Entity #2 | Chains: B,D,F,H
RETINOBLASTOMA-ASSOCIATED PROTEIN protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 14919
95 % 2 2 14002
90 % 2 2 13737
70 % 2 2 12879
50 % 2 2 11492
40 % 2 2 10427
30 % 2 2 9037
Entity #3 | Chains: P,Q,R,S
TRANSCRIPTION FACTOR E2F1 protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.