Sequence Similarity Clusters for the Entities in PDB 1O9D

Entity #1 | Chains: A
14-3-3-LIKE PROTEIN C protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 2502
95 % 3 11 3138 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 11 3190
70 % 88 138 154
50 % 88 142 176
40 % 88 142 189
30 % 88 142 204
Entity #2 | Chains: P
PLASMA MEMBRANE H+ ATPASE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures