Sequence Similarity Clusters for the Entities in PDB 1O96

Entity #1 | Chains: A,C,E,Q
ELECTRON TRANSFERRING FLAVOPROTEIN BETA-SUBUNIT protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 4956
95 % 7 8 5274 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 8 5309
70 % 7 8 5185
50 % 7 8 4930
40 % 7 8 4633
30 % 15 17 2328
Entity #2 | Chains: B,D,F,Z
ELECTRON TRANSFERRING FLAVOPROTEIN ALPHA-SUBUNIT protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7852
95 % 7 8 5275 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 7 8 5310
70 % 7 8 5186
50 % 7 8 4931
40 % 7 8 4634
30 % 15 16 2545

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures