Sequence Similarity Clusters for the Entities in PDB 1O96

Entity #1 | Chains: A,C,E,Q
ELECTRON TRANSFERRING FLAVOPROTEIN BETA-SUBUNIT protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 4505
95 % 7 8 5302 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 8 5332
70 % 7 8 5226
50 % 7 8 4985
40 % 7 8 4710
30 % 15 17 2338
Entity #2 | Chains: B,D,F,Z
ELECTRON TRANSFERRING FLAVOPROTEIN ALPHA-SUBUNIT protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7383
95 % 7 8 5270 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 7 8 5299
70 % 7 8 5184
50 % 7 8 4953
40 % 7 8 4680
30 % 15 16 2549

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures