Sequence Similarity Clusters for the Entities in PDB 1O96

Entity #1 | Chains: A,C,E,Q
ELECTRON TRANSFERRING FLAVOPROTEIN BETA-SUBUNIT protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 4416
95 % 7 8 5213 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 7 8 5236
70 % 7 8 5132
50 % 7 8 4908
40 % 7 8 4643
30 % 15 17 2300
Entity #2 | Chains: B,D,F,Z
ELECTRON TRANSFERRING FLAVOPROTEIN ALPHA-SUBUNIT protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7248
95 % 7 8 5183 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 7 8 5205
70 % 7 8 5095
50 % 7 8 4877
40 % 7 8 4614
30 % 15 16 2512

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures