Sequence Similarity Clusters for the Entities in PDB 1O94

Entity #1 | Chains: A,B
TRIMETHYLAMINE DEHYDROGENASE protein, length: 729 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 7770
95 % 1 5 7335 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 5 7294
70 % 1 5 7073
50 % 1 5 6543
40 % 1 6 5242
30 % 1 6 4657
Entity #2 | Chains: C,E
ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 5256
95 % 6 8 5573 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 6 8 5588
70 % 6 8 5438
50 % 6 8 5137
40 % 6 8 4831
30 % 9 18 2329
Entity #3 | Chains: D,F
ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 8265
95 % 6 8 5574 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 6 8 5589
70 % 6 8 5439
50 % 6 8 5138
40 % 6 8 4832
30 % 9 17 2541

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4L2I 2 B Electron transfer flavoprotein alpha/beta-subunit 905
2 4KPU 2 B Electron transfer flavoprotein alpha/beta-subunit 905
3 5OW0 1 B Electron transfer flavoprotein, beta subunit 28232
4 3CLS 1 C Electron transfer flavoprotein subunit beta 17
5 1O97 1 C ELECTRON TRANSFERRING FLAVOPROTEIN BETA-SUBUNIT 17
6 3CLU 1 C Electron transfer flavoprotein subunit beta 17
7 3CLR 1 C Electron transfer flavoprotein subunit beta 17
8 3CLT 1 C Electron transfer flavoprotein subunit beta 17
9 1O94 2 C, E ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT 17
10 1EFV 2 B ELECTRON TRANSFER FLAVOPROTEIN COFACTORS FAD 1 AND AMP 1 ARE NON-COVALENTLY BOUND 9606
11 2A1U 2 B Electron transfer flavoprotein beta-subunit 9606
12 1EFP 2 B, D PROTEIN (ELECTRON TRANSFER FLAVOPROTEIN) FAD AND AMP COFACTORS ARE NONCOVALENTLY BOUND 266
13 2A1T 3 S Electron transfer flavoprotein beta-subunit 9606
14 1T9G 3 S Electron transfer flavoprotein beta-subunit 9606
15 5OL2 2 B, E Electron transfer flavoprotein small subunit 1496
16 1O96 1 A, C, E, Q ELECTRON TRANSFERRING FLAVOPROTEIN BETA-SUBUNIT 17
17 6FAH 2 B, F Caffeyl-CoA reductase-Etf complex subunit CarD 1 FAD 33952 1.3.1.108 | Details
18 1O95 2 C, E ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT 17