Sequence Similarity Clusters for the Entities in PDB 1O8S

Entity #1 | Chains: A
PUTATIVE ENDO-XYLANASE protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28865
95 % 2 3 23988 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 3 23188
70 % 2 3 21135
50 % 2 3 18290
40 % 2 3 16297
30 % 2 6 8452

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures