Sequence Similarity Clusters for the Entities in PDB 1O8M

Entity #1 | Chains: A
PECTATE LYASE C protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 3822
95 % 6 15 4312 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 6 15 4341
70 % 6 15 4263
50 % 6 15 4112
40 % 9 18 2825
30 % 11 20 2434

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1O88 1 A PECTATE LYASE C 556 4.2.2.2 | Details
2 1O8L 1 A PECTATE LYASE C 556 4.2.2.2 | Details
3 1AIR 1 A PECTATE LYASE C 556 4.2.2.2 | Details
4 1O8J 1 A PECTATE LYASE C 556 4.2.2.2 | Details
5 1O8G 1 A PECTATE LYASE C 556 4.2.2.2 | Details
6 1O8M 1 A PECTATE LYASE C 556 4.2.2.2 | Details
7 2PEC 1 A PECTATE LYASE C 556 4.2.2.2 | Details
8 1O8D 1 A PECTATE LYASE C 556 4.2.2.2 | Details
9 1O8K 1 A PECTATE LYASE C 556 4.2.2.2 | Details
10 1O8I 1 A PECTATE LYASE C 556 4.2.2.2 | Details
11 1O8F 1 A PECTATE LYASE C 556 4.2.2.2 | Details
12 1O8H 1 A PECTATE LYASE C 556 4.2.2.2 | Details
13 1O8E 1 A PECTATE LYASE C 556 4.2.2.2 | Details
14 1PLU 1 A PROTEIN (PECTATE LYASE C) 556 4.2.2.2 | Details