Sequence Similarity Clusters for the Entities in PDB 1O8K

Entity #1 | Chains: A
PECTATE LYASE C protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 15 4591
95 % 9 15 4934 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 9 15 4955
70 % 9 15 4815
50 % 9 15 4569
40 % 12 18 3099
30 % 14 20 2692

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures