Sequence Similarity Clusters for the Entities in PDB 1O8K

Entity #1 | Chains: A
PECTATE LYASE C protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 15 4377
95 % 9 15 4715 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 9 15 4752
70 % 9 15 4641
50 % 9 15 4444
40 % 12 18 3017
30 % 14 20 2612

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures