Sequence Similarity Clusters for the Entities in PDB 1O8F

Entity #1 | Chains: A
PECTATE LYASE C protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 15 4322
95 % 11 15 4658 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 11 15 4693
70 % 11 15 4576
50 % 11 15 4389
40 % 14 18 2986
30 % 16 20 2586

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures