Sequence Similarity Clusters for the Entities in PDB 1O8D

Entity #1 | Chains: A
PECTATE LYASE C protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 3681
95 % 8 15 4185 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 8 15 4209
70 % 8 15 4119
50 % 8 15 3996
40 % 11 18 2758
30 % 13 20 2369

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.