Sequence Similarity Clusters for the Entities in PDB 1O8C

Entity #1 | Chains: A,B,C,D
YHDH protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14857
95 % 2 2 14048 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 2 2 13825
70 % 3 3 9656
50 % 6 9 2205
40 % 6 9 2194
30 % 6 9 2099

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures