Sequence Similarity Clusters for the Entities in PDB 1O8C

Entity #1 | Chains: A,B,C,D
YHDH protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14427
95 % 2 2 13651 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 2 2 13431
70 % 3 3 9397
50 % 3 3 8532
40 % 4 7 2549
30 % 4 7 2414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.