Sequence Similarity Clusters for the Entities in PDB 1O88

Entity #1 | Chains: A
PECTATE LYASE C protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 14 3944
95 % 1 15 4421 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 15 4448
70 % 1 15 4364
50 % 1 15 4202
40 % 4 18 2887
30 % 6 20 2490

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures