Sequence Similarity Clusters for the Entities in PDB 1O87

Entity #1 | Chains: A,B
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 2109
95 % 13 19 1982 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 13 19 2030
70 % 13 19 2055
50 % 13 19 2067
40 % 13 21 1793
30 % 24 51 667

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures