Sequence Similarity Clusters for the Entities in PDB 1O87

Entity #1 | Chains: A,B
SIGNAL RECOGNITION PARTICLE PROTEIN protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 4762
95 % 13 19 2091 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 13 19 2147
70 % 13 19 2151
50 % 13 19 2155
40 % 13 21 1837
30 % 27 54 644

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures