Sequence Similarity Clusters for the Entities in PDB 1O83

Entity #1 | Chains: A,B,C,D
PEPTIDE ANTIBIOTIC AS-48 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 5969
95 % 3 5 5313 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 5 5335
70 % 3 5 5250
50 % 3 5 5019
40 % 3 5 4747
30 % 3 6 4100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures