Sequence Similarity Clusters for the Entities in PDB 1O83

Entity #1 | Chains: A,B,C,D
PEPTIDE ANTIBIOTIC AS-48 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 6103
95 % 3 5 5437 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 5 5466
70 % 3 5 5370
50 % 3 5 5120
40 % 3 5 4835
30 % 3 6 4186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures