Sequence Similarity Clusters for the Entities in PDB 1O83

Entity #1 | Chains: A,B,C,D
PEPTIDE ANTIBIOTIC AS-48 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 5874
95 % 3 5 5228 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 5 5250
70 % 3 5 5170
50 % 3 5 4940
40 % 3 5 4675
30 % 3 6 4050

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.