Sequence Similarity Clusters for the Entities in PDB 1O82

Entity #1 | Chains: A,B,C,D
PEPTIDE ANTIBIOTIC AS-48 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 6425
95 % 2 5 5378 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 5 5409
70 % 2 5 5200
50 % 2 5 4939
40 % 2 5 4642
30 % 2 5 4174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures