Sequence Similarity Clusters for the Entities in PDB 1O7P

Entity #1 | Chains: A
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 24 1702
95 % 24 27 1968 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 24 27 2016
70 % 27 31 1606
50 % 27 31 1649
40 % 31 50 439
30 % 31 52 420
Entity #2 | Chains: B
NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 27 1495
95 % 24 27 2001 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 24 27 2049
70 % 27 31 1635
50 % 27 31 1673
40 % 27 31 1690
30 % 27 31 1652

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures