Sequence Similarity Clusters for the Entities in PDB 1O7M

Entity #1 | Chains: A
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 24 1753
95 % 20 27 2047 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 20 27 2098
70 % 23 31 1647
50 % 23 31 1692
40 % 26 50 449
30 % 26 52 426
Entity #2 | Chains: B
NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 27 1534
95 % 20 27 2072 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 20 27 2124
70 % 23 31 1675
50 % 23 31 1716
40 % 23 31 1729
30 % 23 31 1690

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures