Sequence Similarity Clusters for the Entities in PDB 1O7M

Entity #1 | Chains: A
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 24 1674
95 % 20 27 1941 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 20 27 1988
70 % 23 31 1584
50 % 23 31 1622
40 % 26 50 425
30 % 26 52 404
Entity #2 | Chains: B
NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 27 1477
95 % 20 27 1975 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 20 27 2024
70 % 23 31 1608
50 % 23 31 1642
40 % 23 31 1662
30 % 23 31 1626

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.