Sequence Similarity Clusters for the Entities in PDB 1O7M

Entity #1 | Chains: A
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 24 1716
95 % 20 27 2009 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 20 27 2057
70 % 23 31 1624
50 % 23 31 1664
40 % 26 50 443
30 % 26 52 424
Entity #2 | Chains: B
NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 27 1512
95 % 20 27 2036 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 20 27 2086
70 % 23 31 1651
50 % 23 31 1688
40 % 23 31 1705
30 % 23 31 1669

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures