Sequence Similarity Clusters for the Entities in PDB 1O7M

Entity #1 | Chains: A
NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 24 1610
95 % 20 27 1886 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 20 27 1931
70 % 23 31 1530
50 % 23 31 1562
40 % 26 50 408
30 % 26 52 384
Entity #2 | Chains: B
NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 27 1422
95 % 20 27 1919 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 20 27 1967
70 % 23 31 1553
50 % 23 31 1585
40 % 23 31 1611
30 % 23 31 1579

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.