Sequence Similarity Clusters for the Entities in PDB 1O7D

Entity #1 | Chains: A
Lysosomal alpha-mannosidase protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58934
95 % 1 1 40422
90 % 1 1 38500
70 % 1 1 34045
50 % 1 1 28922
40 % 1 1 25353
30 % 1 1 21121
Entity #2 | Chains: B
Lysosomal alpha-mannosidase protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49242
95 % 1 1 40835
90 % 1 1 38883
70 % 1 1 34367
50 % 1 1 34120
40 % 1 1 25604
30 % 1 1 21327
Entity #3 | Chains: C
Lysosomal alpha-mannosidase protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48734
95 % 1 1 40421
90 % 1 1 38499
70 % 1 1 34044
50 % 1 1 28921
40 % 1 1 25352
30 % 1 1 21120
Entity #4 | Chains: D
Lysosomal alpha-mannosidase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56867
95 % 1 1 46685
90 % 1 1 44335
70 % 1 1 34366
50 % 1 1 29201
40 % 1 1 25603
30 % 1 1 21326
Entity #5 | Chains: E
Lysosomal alpha-mannosidase protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48733
95 % 1 1 40420
90 % 1 1 38498
70 % 1 1 34043
50 % 1 1 28920
40 % 1 1 25351
30 % 1 1 21119

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1O7D 5 E Lysosomal alpha-mannosidase GLYCOSYLATED ALPHA-MANNOSIDASE E PEPTIDE, RESIDUES 874-999 9913 3.2.1.24 | Details