Sequence Similarity Clusters for the Entities in PDB 1O7D

Entity #1 | Chains: A
Lysosomal alpha-mannosidase protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60061
95 % 1 1 41215
90 % 1 1 39246
70 % 1 1 34656
50 % 1 1 29426
40 % 1 1 25790
30 % 1 1 21467
Entity #2 | Chains: B
Lysosomal alpha-mannosidase protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50220
95 % 1 1 41636
90 % 1 1 39636
70 % 1 1 34982
50 % 1 1 34708
40 % 1 1 26049
30 % 1 1 21682
Entity #3 | Chains: C
Lysosomal alpha-mannosidase protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49708
95 % 1 1 41214
90 % 1 1 39245
70 % 1 1 34655
50 % 1 1 29425
40 % 1 1 25789
30 % 1 1 21466
Entity #4 | Chains: D
Lysosomal alpha-mannosidase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50218
95 % 1 1 41635
90 % 1 1 39635
70 % 1 1 34981
50 % 1 1 29714
40 % 1 1 26048
30 % 1 1 21681
Entity #5 | Chains: E
Lysosomal alpha-mannosidase protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49707
95 % 1 1 41213
90 % 1 1 39244
70 % 1 1 34654
50 % 1 1 29424
40 % 1 1 25788
30 % 1 1 21465

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1O7D 5 E Lysosomal alpha-mannosidase GLYCOSYLATED ALPHA-MANNOSIDASE E PEPTIDE, RESIDUES 874-999 9913 3.2.1.24 | Details