Sequence Similarity Clusters for the Entities in PDB 1O7D

Entity #1 | Chains: A
Lysosomal alpha-mannosidase protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59316
95 % 1 1 40668
90 % 1 1 38739
70 % 1 1 34248
50 % 1 1 29087
40 % 1 1 25499
30 % 1 1 21233
Entity #2 | Chains: B
Lysosomal alpha-mannosidase protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49561
95 % 1 1 41086
90 % 1 1 39125
70 % 1 1 34573
50 % 1 1 34308
40 % 1 1 25749
30 % 1 1 21440
Entity #3 | Chains: C
Lysosomal alpha-mannosidase protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49045
95 % 1 1 40667
90 % 1 1 38738
70 % 1 1 34247
50 % 1 1 29086
40 % 1 1 25498
30 % 1 1 21232
Entity #4 | Chains: D
Lysosomal alpha-mannosidase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57239
95 % 1 1 46956
90 % 1 1 44586
70 % 1 1 34572
50 % 1 1 29368
40 % 1 1 25748
30 % 1 1 21439
Entity #5 | Chains: E
Lysosomal alpha-mannosidase protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49044
95 % 1 1 40666
90 % 1 1 38737
70 % 1 1 34246
50 % 1 1 29085
40 % 1 1 25497
30 % 1 1 21231

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1O7D 4 D Lysosomal alpha-mannosidase GLYCOSYLATED ALPHA-MANNOSIDASE D PEPTIDE, RESIDUES 592-873 9913 3.2.1.24 | Details