Sequence Similarity Clusters for the Entities in PDB 1O7D

Entity #1 | Chains: A
Lysosomal alpha-mannosidase protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57677
95 % 1 1 39513
90 % 1 1 37650
70 % 1 1 33329
50 % 1 1 28296
40 % 1 1 24793
30 % 1 1 20659
Entity #2 | Chains: B
Lysosomal alpha-mannosidase protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48136
95 % 1 1 39918
90 % 1 1 38024
70 % 1 1 33644
50 % 1 1 28566
40 % 1 1 25035
30 % 1 1 20861
Entity #3 | Chains: C
Lysosomal alpha-mannosidase protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47639
95 % 1 1 39512
90 % 1 1 37649
70 % 1 1 33328
50 % 1 1 28295
40 % 1 1 24792
30 % 1 1 20658
Entity #4 | Chains: D
Lysosomal alpha-mannosidase protein, length: 282 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47637
95 % 1 1 39510
90 % 1 1 37647
70 % 1 1 33326
50 % 1 1 28293
40 % 1 1 24790
30 % 1 1 20656
Entity #5 | Chains: E
Lysosomal alpha-mannosidase protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47638
95 % 1 1 39511
90 % 1 1 37648
70 % 1 1 33327
50 % 1 1 28294
40 % 1 1 24791
30 % 1 1 20657

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1O7D 2 B Lysosomal alpha-mannosidase GLYCOSYLATED ALPHA-MANNOSIDASE B PEPTIDE, RESIDUES 348-431 9913 3.2.1.24 | Details