Sequence Similarity Clusters for the Entities in PDB 1O6S

Entity #1 | Chains: A
INTERNALIN A protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16925
95 % 7 10 6098 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 7 10 6088
70 % 7 10 5938
50 % 7 10 5551
40 % 7 10 5210
30 % 7 10 4682
Entity #2 | Chains: B
E-CADHERIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10538
95 % 5 9 6351 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 5 10 5948
70 % 5 10 5812
50 % 5 14 3196
40 % 6 18 2500
30 % 6 21 1874

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.