Sequence Similarity Clusters for the Entities in PDB 1O6S

Entity #1 | Chains: A
INTERNALIN A protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 16658
95 % 7 10 5959
90 % 7 10 5951
70 % 7 10 5826
50 % 7 10 5457
40 % 7 10 5131
30 % 7 10 4615
Entity #2 | Chains: B
E-CADHERIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10368
95 % 5 9 6224 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 5 10 5825
70 % 5 10 5703
50 % 5 14 3147
40 % 6 18 2458
30 % 6 21 1849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.