Sequence Similarity Clusters for the Entities in PDB 1O6S

Entity #1 | Chains: A
INTERNALIN A protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 18156
95 % 7 10 6685 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 7 10 6672
70 % 7 10 6466
50 % 7 10 6029
40 % 7 10 5605
30 % 9 22 1658
Entity #2 | Chains: B
E-CADHERIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 11525
95 % 5 9 6672 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 10 6135
70 % 5 10 5837
50 % 5 14 3399
40 % 6 18 2618
30 % 6 21 1951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures