Sequence Similarity Clusters for the Entities in PDB 1O6S

Entity #1 | Chains: A
INTERNALIN A protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 17224
95 % 7 10 6185 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 7 10 6175
70 % 7 10 6037
50 % 7 10 5643
40 % 7 10 5298
30 % 7 10 4755
Entity #2 | Chains: B
E-CADHERIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10695
95 % 5 9 6440 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 10 6041
70 % 5 10 5904
50 % 5 14 3250
40 % 6 18 2535
30 % 6 21 1903

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.