Sequence Similarity Clusters for the Entities in PDB 1O6S

Entity #1 | Chains: A
INTERNALIN A protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 17650
95 % 7 10 6333 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 7 10 6326
70 % 7 10 6170
50 % 7 10 5767
40 % 7 10 5417
30 % 7 10 4855
Entity #2 | Chains: B
E-CADHERIN protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10954
95 % 5 9 6590 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 10 6188
70 % 5 10 6033
50 % 5 14 3312
40 % 6 18 2600
30 % 6 21 1945

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures