Sequence Similarity Clusters for the Entities in PDB 1O6O

Entity #1 | Chains: A,B,C
IMPORTIN BETA-1 SUBUNIT protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11206
95 % 4 6 5808 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 4 6 5823
70 % 4 6 5692
50 % 4 6 5372
40 % 4 6 5017
30 % 4 6 4472
Entity #2 | Chains: D,E,F
NUCLEOPORIN NSP1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 25647
95 % 1 1 22622
90 % 1 1 21905
70 % 1 1 20006
50 % 1 1 17263
40 % 1 1 15269
30 % 1 1 12787

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures