Sequence Similarity Clusters for the Entities in PDB 1O6O

Entity #1 | Chains: A,B,C
IMPORTIN BETA-1 SUBUNIT protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10018
95 % 4 6 5323 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.8
PDBFlex
90 % 4 6 5341
70 % 4 6 5276
50 % 4 6 5020
40 % 4 6 4744
30 % 4 6 4331
Entity #2 | Chains: D,E,F
NUCLEOPORIN NSP1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29009
95 % 1 1 24083
90 % 1 1 23301
70 % 1 1 21217
50 % 1 1 18376
40 % 1 1 16373
30 % 1 1 14009

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.