Sequence Similarity Clusters for the Entities in PDB 1O6O

Entity #1 | Chains: A,B,C
IMPORTIN BETA-1 SUBUNIT protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 10156
95 % 4 6 5401 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.6
PDBFlex
90 % 4 6 5422
70 % 4 6 5345
50 % 4 6 5086
40 % 4 6 4810
30 % 4 6 4389
Entity #2 | Chains: D,E,F
NUCLEOPORIN NSP1 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29370
95 % 1 1 24381
90 % 1 1 23578
70 % 1 1 21446
50 % 1 1 18562
40 % 1 1 16536
30 % 1 1 14149

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures