Sequence Similarity Clusters for the Entities in PDB 1O6J

Entity #1 | Chains: A,B
TRYPAREDOXIN II protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 7479
95 % 7 7 6540 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 7 7 6525
70 % 7 7 6365
50 % 15 16 3164
40 % 15 16 3080
30 % 15 16 2889

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures